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科学研究

2010

Original Research Articles

  1. Zhu, Yongqun, Hu, Liyan, Zhou, Yan, Yao, Qing, Liu, Liping & Shao, Feng*. Structural mechanism of host Rab1 activation by the bifunctional Legionella type IV effector SidM/DrrA. Proc Natl Acad Sci U S A 107, 4699-4704, doi:10.1073/pnas.0914231107 (2010).


  2. Zhou, Junli, Wang, Xiangfeng, He, Kun, Charron, Jean-Benoit F, Elling, Axel A & Deng, Xing Wang*. Genome-wide profiling of histone H3 lysine 9 acetylation and dimethylation in Arabidopsis reveals correlation between multiple histone marks and gene expression. Plant Mol Biol 72, 585-595, doi:10.1007/s11103-009-9594-7 (2010).


  3. Zhao, Rui & Xi, Rongwen*. Stem cell competition for niche occupancy: emerging themes and mechanisms. Stem Cell Rev Rep 6, 345-350, doi:10.1007/s12015-010-9128-3 (2010).


  4. Zhao, Qingguo, Wang, Jianle, Zhang, Yu, Kou, Zhaohui, Liu, Sheng & Gao, Shaorong*. Generation of histocompatible androgenetic embryonic stem cells using spermatogenic cells. Stem Cells 28, 229-239, doi:10.1002/stem.283 (2010).


  5. Zhang, Yaxi, Yang, Yuanai, Fang, Bin, Gannon, Patrick, Ding, Pingtao, Li, Xin & Zhang, Yuelin*. Arabidopsis snc2-1D activates receptor-like protein-mediated immunity transduced through WRKY70. Plant Cell 22, 3153-3163, doi:10.1105/tpc.110.074120 (2010).


  6. Zhang, Yaxi, Xu, Shaohua, Ding, Pingtao, Wang, Dongmei, Cheng, Yu Ti, He, Jing, Gao, Minghui, Xu, Fang, Li, Yan, Zhu, Zhaohai, Li, Xin & Zhang, Yuelin*. Control of salicylic acid synthesis and systemic acquired resistance by two members of a plant-specific family of transcription factors. Proc Natl Acad Sci U S A 107, 18220-18225, doi:10.1073/pnas.1005225107 (2010).


  7. Zhang, Jie & Zhou, Jian-Min*. Plant immunity triggered by microbial molecular signatures. Mol Plant 3, 783-793, doi:10.1093/mp/ssq035 (2010).


  8. Zhang, Jie, Li, Wei, Xiang, Tingting, Liu, Zixu, Laluk, Kristin, Ding, Xiaojun, Zou, Yan, Gao, Minghui, Zhang, Xiaojuan, Chen, She, Mengiste, Tesfaye, Zhang, Yuelin & Zhou, Jian-Min. Receptor-like cytoplasmic kinases integrate signaling from multiple plant immune receptors and are targeted by a Pseudomonas syringae effector. Cell Host Microbe 7, 290-301, doi:10.1016/j.chom.2010.03.007 (2010).


  9. Zhan, Cheng & Luo, Minmin*. Diverse patterns of odor representation by neurons in the anterior piriform cortex of awake mice. J Neurosci 30, 16662-16672, doi:10.1523/JNEUROSCI.4400-10.2010 (2010).


  10. Xu, Mo#, Long, Chengzu#, Chen, Xiuzhen, Huang, Chang, Chen, She* & Zhu, Bing*. Partitioning of histone H3-H4 tetramers during DNA replication-dependent chromatin assembly. Science 328, 94-98, doi:10.1126/science.1178994 (2010).


  11. Wu, Liang, Zhou, Huanyu, Zhang, Qingqing, Zhang, Jianguang, Ni, Fangrui, Liu, Chang & Qi, Yijun*. DNA methylation mediated by a microRNA pathway. Mol Cell 38, 465-475, doi:10.1016/j.molcel.2010.03.008 (2010).


  12. Wang, Shufang, Kou, Zhaohui, Jing, Zhiyi, Zhang, Yu, Guo, Xinzheng, Dong, Mengqiu, Wilmut, Ian & Gao, Shaorong*. Proteome of mouse oocytes at different developmental stages. Proc Natl Acad Sci U S A 107, 17639-17644, doi:10.1073/pnas.1013185107 (2010).


  13. Tian, Ye, Ren, Haiyan, Zhao, Yu, Lu, Qun, Huang, Xinxin, Yang, Peiguo & Zhang, Hong*. Four metazoan autophagy genes regulate cargo recognition, autophagosome formation and autolysosomal degradation. Autophagy 6, 984-985, doi:10.4161/auto.6.7.13156 (2010).


  14. Tian, Ye, Li, Zhipeng, Hu, Wanqiu, Ren, Haiyan, Tian, E, Zhao, Yu, Lu, Qun, Huang, Xinxin, Yang, Peiguo, Li, Xin, Wang, Xiaochen, Kovacs, Attila L, Yu, Li* & Zhang, Hong*. C. elegans screen identifies autophagy genes specific to multicellular organisms. Cell 141, 1042-1055, doi:10.1016/j.cell.2010.04.034 (2010).


  15. Tan, Jie, Savigner, Agnes, Ma, Minghong & Luo, Minmin*. Odor information processing by the olfactory bulb analyzed in gene-targeted mice. Neuron 65, 912-926, doi:10.1016/j.neuron.2010.02.011 (2010).


  16. Sun, Rui-Xiang*, Dong, Meng-Qiu*, Song, Chun-Qing, Chi, Hao, Yang, Bing, Xiu, Li-Yun, Tao, Li, Jing, Zhi-Yi, Liu, Chao, Wang, Le-Heng, Fu, Yan & He, Si-Min. Improved peptide identification for proteomic analysis based on comprehensive characterization of electron transfer dissociation spectra. J. Proteome Res. 9, 6354-6367, doi:10.1021/pr100648r (2010).


  17. Sun, P., Quan, Z., Zhang, B., Wu, T. & Xi, R. TSC1/2 tumour suppressor complex maintains Drosophila germline stem cells by preventing differentiation. Development 137, 2461-2469, doi:10.1242/dev.051466 (2010).


  18. Qi, Yijun* & Mi, Shijun. Purification of Arabidopsis argonaute complexes and associated small RNAs. Methods Mol Biol 592, 243-254, doi:10.1007/978-1-60327-005-2_16 (2010).


  19. Lin, Guonan, Xu, Na & Xi, Rongwen*. Paracrine unpaired signaling through the JAK/STAT pathway controls self-renewal and lineage differentiation of drosophila intestinal stem cells. J Mol Cell Biol 2, 37-49, doi:10.1093/jmcb/mjp028 (2010).


  20. Li, Yingzhong, Li, Shuxin, Bi, Dongling, Cheng, Yu Ti, Li, Xin & Zhang, Yuelin*. SRFR1 negatively regulates plant NB-LRR resistance protein accumulation to prevent autoimmunity. PLoS Pathog 6, e1001111, doi:10.1371/journal.ppat.1001111 (2010).


  21. Li, Xinghua, Han, Yue & Xi, Rongwen*. Polycomb group genes Psc and Su(z)2 restrict follicle stem cell self-renewal and extrusion by controlling canonical and noncanonical Wnt signaling. Genes Dev 24, 933-946, doi:10.1101/gad.1901510 (2010).


  22. Kou, Zhaohui, Kang, Lan, Yuan, Ye, Tao, Yu, Zhang, Yu, Wu, Tong, He, Jing, Wang, Jianle, Liu, Zhonghua & Gao, Shaorong*. Mice cloned from induced pluripotent stem cells (iPSCs). Biol Reprod 83, 238-243, doi:10.1095/biolreprod.110.084731 (2010).


  23. Kang, Lan, Kou, Zhaohui, Zhang, Yu & Gao, Shaorong*. Induced pluripotent stem cells (iPSCs)--a new era of reprogramming. J Genet Genomics 37, 415-421, doi:10.1016/S1673-8527(09)60060-6 (2010).


  24. Huang, Zhiwei & Chai, Jijie*. Mapping the selection mechanisms by bacterial GEFs. Virulence 1, 93-96, doi:10.4161/viru.1.2.10617 (2010).


  25. Huang, Niu* & Jacobson, Matthew P. Binding-site assessment by virtual fragment screening. PLoS One 5, e10109, doi:10.1371/journal.pone.0010109 (2010).


  26. Hu, Jianjun, Wang, Fengchao, Yuan, Ye, Zhu, Xiaoquan, Wang, Yixuan, Zhang, Yu, Kou, Zhaohui, Wang, Shufang & Gao, Shaorong*. Novel importin-alpha family member Kpna7 is required for normal fertility and fecundity in the mouse. J Biol Chem 285, 33113-33122, doi:10.1074/jbc.M110.117044 (2010).


  27. Han, Zhifu, Niu, Tianhui, Chang, Junbiao, Lei, Xiaoguang, Zhao, Mingyan, Wang, Qiang, Cheng, Wei, Wang, Jinjing, Feng, Yi & Chai, Jijie*. Crystal structure of the FTO protein reveals basis for its substrate specificity. Nature 464, 1205-1209, doi:10.1038/nature08921 (2010).


  28. Han, Zhifu, Huang, Ning, Niu, Tianhui & Chai, Jijie*. A loop matters for FTO substrate selection. Protein Cell 1, 616-620, doi:10.1007/s13238-010-0082-2 (2010).


  29. Han, Tian Xu, Xu, Xing-Ya, Zhang, Mei-Jun, Peng, Xu & Du, Li-Lin*. Global fitness profiling of fission yeast deletion strains by barcode sequencing. Genome Biol 11, R60, doi:10.1186/gb-2010-11-6-r60 (2010).


  30. Han, Jinlong & Luo, Minmin*. Loss of CO2 sensing by the olfactory system of CNGA3 knockout mice. Current Zoology 56, 793-799, doi:10.1093/czoolo/56.6.793 (2010).


  31. Guo, Pengfei & Wang, Xiaochen*. Rab GTPases act in sequential steps to regulate phagolysosome formation. Small GTPases 1, 170-173, doi:10.4161/sgtp.1.3.14511 (2010).


  32. Gong, Yi-Nan, Wang, Xiaoming, Wang, Jiayi, Yang, Zhenxiao, Li, Shan, Yang, Jieling, Liu, Liping, Lei, Xiaoguang* & Shao, Feng*. Chemical probing reveals insights into the signaling mechanism of inflammasome activation. Cell Res 20, 1289-1305, doi:10.1038/cr.2010.135 (2010).


  33. Gao, L., Hu, J., Zhong, C. & Luo, Minmin*. Integration of CO2 and odorant signals in the mouse olfactory bulb. Neuroscience 170, 881-892, doi:10.1016/j.neuroscience.2010.08.006 (2010).


  34. Fang, Min, Shen, Zhirong, Huang, Song, Zhao, Liping, Chen, She, Mak, Tak W & Wang, Xiaodong*. The ER UDPase ENTPD5 promotes protein N-glycosylation, the Warburg effect, and proliferation in the PTEN pathway. Cell 143, 711-724, doi:10.1016/j.cell.2010.10.010 (2010).


  35. Dong, Na, Liu, Liping & Shao, Feng*. A bacterial effector targets host DH-PH domain RhoGEFs and antagonizes macrophage phagocytosis. EMBO J 29, 1363-1376, doi:10.1038/emboj.2010.33 (2010).


  36. Cui, Jixin, Yao, Qing, Li, Shan, Ding, Xiaojun, Lu, Qiuhe, Mao, Haibin, Liu, Liping, Zheng, Ning, Chen, She & Shao, Feng*. Glutamine deamidation and dysfunction of ubiquitin/NEDD8 induced by a bacterial effector family. Science 329, 1215-1218, doi:10.1126/science.1193844 (2010).


  37. Chi, Hao, Sun, Rui-Xiang, Yang, Bing, Song, Chun-Qing, Wang, Le-Heng, Liu, Chao, Fu, Yan, Yuan, Zuo-Fei, Wang, Hai-Peng, He, Si-Min* & Dong, Meng-Qiu*. pNovo: de novo peptide sequencing and identification using HCD spectra. J. Proteome Res. 9, 2713-2724, doi:10.1021/pr100182k (2010).



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